Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl1941 | Cgl1942 | cg2127 | cg2128 | Conserved hypothetical protein. | Putative secreted or membrane protein. | 0.802 |
Cgl1941 | hflX | cg2127 | cg2126 | Conserved hypothetical protein. | GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.590 |
Cgl1941 | uraA | cg2127 | cg2125 | Conserved hypothetical protein. | PUTATIVE URACYL PERMEASE. | 0.524 |
Cgl1942 | Cgl1941 | cg2128 | cg2127 | Putative secreted or membrane protein. | Conserved hypothetical protein. | 0.802 |
Cgl1942 | hflX | cg2128 | cg2126 | Putative secreted or membrane protein. | GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.525 |
Cgl1942 | uraA | cg2128 | cg2125 | Putative secreted or membrane protein. | PUTATIVE URACYL PERMEASE. | 0.520 |
hflX | Cgl1941 | cg2126 | cg2127 | GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Conserved hypothetical protein. | 0.590 |
hflX | Cgl1942 | cg2126 | cg2128 | GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Putative secreted or membrane protein. | 0.525 |
hflX | uraA | cg2126 | cg2125 | GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | PUTATIVE URACYL PERMEASE. | 0.746 |
uraA | Cgl1941 | cg2125 | cg2127 | PUTATIVE URACYL PERMEASE. | Conserved hypothetical protein. | 0.524 |
uraA | Cgl1942 | cg2125 | cg2128 | PUTATIVE URACYL PERMEASE. | Putative secreted or membrane protein. | 0.520 |
uraA | hflX | cg2125 | cg2126 | PUTATIVE URACYL PERMEASE. | GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.746 |