Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0130 | Cgl2055 | cg0166 | cg2254 | REPEAT CONTAINING PROTEIN. | Ankyrin repeat protein. | 0.479 |
Cgl0130 | Cgl2345 | cg0166 | cg2575 | REPEAT CONTAINING PROTEIN. | Ankyrin repeat protein. | 0.416 |
Cgl0130 | dinF | cg0166 | cg2173 | REPEAT CONTAINING PROTEIN. | PUTATIVE DNA-DAMAGE-INDUCIBLE MEMBRANE PROTEIN. | 0.718 |
Cgl0735 | dinF | cg0842 | cg2173 | PUTATIVE DNA HELICASE. | PUTATIVE DNA-DAMAGE-INDUCIBLE MEMBRANE PROTEIN. | 0.701 |
Cgl0735 | dinP | cg0842 | cg2355 | PUTATIVE DNA HELICASE. | Nucleotidyltransferase/DNA polymerase involved in DNA repair, DinP homolog; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.434 |
Cgl0735 | topA | cg0842 | cg0373 | PUTATIVE DNA HELICASE. | DNA TOPOISOMERASE; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.949 |
Cgl1983 | dinF | cg2174 | cg2173 | Exopolyphosphatase-related protein. | PUTATIVE DNA-DAMAGE-INDUCIBLE MEMBRANE PROTEIN. | 0.879 |
Cgl1983 | rbfA | cg2174 | cg2175 | Exopolyphosphatase-related protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.925 |
Cgl2055 | Cgl0130 | cg2254 | cg0166 | Ankyrin repeat protein. | REPEAT CONTAINING PROTEIN. | 0.479 |
Cgl2055 | Cgl2345 | cg2254 | cg2575 | Ankyrin repeat protein. | Ankyrin repeat protein. | 0.676 |
Cgl2055 | dinF | cg2254 | cg2173 | Ankyrin repeat protein. | PUTATIVE DNA-DAMAGE-INDUCIBLE MEMBRANE PROTEIN. | 0.962 |
Cgl2345 | Cgl0130 | cg2575 | cg0166 | Ankyrin repeat protein. | REPEAT CONTAINING PROTEIN. | 0.416 |
Cgl2345 | Cgl2055 | cg2575 | cg2254 | Ankyrin repeat protein. | Ankyrin repeat protein. | 0.676 |
Cgl2345 | dinF | cg2575 | cg2173 | Ankyrin repeat protein. | PUTATIVE DNA-DAMAGE-INDUCIBLE MEMBRANE PROTEIN. | 0.962 |
dinF | Cgl0130 | cg2173 | cg0166 | PUTATIVE DNA-DAMAGE-INDUCIBLE MEMBRANE PROTEIN. | REPEAT CONTAINING PROTEIN. | 0.718 |
dinF | Cgl0735 | cg2173 | cg0842 | PUTATIVE DNA-DAMAGE-INDUCIBLE MEMBRANE PROTEIN. | PUTATIVE DNA HELICASE. | 0.701 |
dinF | Cgl1983 | cg2173 | cg2174 | PUTATIVE DNA-DAMAGE-INDUCIBLE MEMBRANE PROTEIN. | Exopolyphosphatase-related protein. | 0.879 |
dinF | Cgl2055 | cg2173 | cg2254 | PUTATIVE DNA-DAMAGE-INDUCIBLE MEMBRANE PROTEIN. | Ankyrin repeat protein. | 0.962 |
dinF | Cgl2345 | cg2173 | cg2575 | PUTATIVE DNA-DAMAGE-INDUCIBLE MEMBRANE PROTEIN. | Ankyrin repeat protein. | 0.962 |
dinF | dinP | cg2173 | cg2355 | PUTATIVE DNA-DAMAGE-INDUCIBLE MEMBRANE PROTEIN. | Nucleotidyltransferase/DNA polymerase involved in DNA repair, DinP homolog; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.719 |
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