STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2012ABC-type transport system, involved in lipoprotein release, ATPase component. (230 aa)    
Predicted Functional Partners:
Cgl2011
ABC-type transport system, involved in lipoprotein release, permease component.
 
 
 0.999
Cgl2993
ABC-type transport system, involved in lipoprotein release, permease component.
 
 0.982
Cgl1095
Putative membrane protein.
      
 0.964
Cgl0392
Conserved secreted protein.
   
  
 0.869
Cgl0393
Conserved secreted protein.
   
  
 0.869
cg1438
ABC-type nitrate/sulfonate/taurine/bicarbonate transport system, ATPase component (C-terminal fragme.
 
    
0.858
Cgl0159
Conserved hypothetical protein.
   
  
 0.778
Cgl0716
Conserved hypothetical protein.
   
  
 0.775
Cgl1331
ABC-type amino acid transport system, permease component.
 
 
    0.769
psp1
Putative secreted protein.
   
  
 0.702
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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