Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0073 | Cgl0835 | cg0096 | cg0955 | Conserved hypothetical protein. | Secreted protein. | 0.704 |
Cgl0073 | Cgl2859 | cg0096 | cg3165 | Conserved hypothetical protein. | Putative membrane protein. | 0.706 |
Cgl0073 | cmt4 | cg0096 | cg2394 | Conserved hypothetical protein. | Corynomycolyl transferase. | 0.670 |
Cgl0144 | Cgl0422 | cg0181 | cg0502 | PUTATIVE DNA REPAIR PROTEIN. | Phosphate isomerase/epimerase. | 0.857 |
Cgl0144 | Cgl1089 | cg0181 | cg1239 | PUTATIVE DNA REPAIR PROTEIN. | SIMILAR TO KETOPANTOATE REDUCTASE; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.883 |
Cgl0144 | Cgl1826 | cg0181 | cg2047 | PUTATIVE DNA REPAIR PROTEIN. | Putative secreted protein. | 0.888 |
Cgl0144 | azlD | cg0181 | cg3412 | PUTATIVE DNA REPAIR PROTEIN. | Predicted branched-chain amino acid permease (azaleucine resistance). | 0.923 |
Cgl0144 | cmt4 | cg0181 | cg2394 | PUTATIVE DNA REPAIR PROTEIN. | Corynomycolyl transferase. | 0.877 |
Cgl0422 | Cgl0144 | cg0502 | cg0181 | Phosphate isomerase/epimerase. | PUTATIVE DNA REPAIR PROTEIN. | 0.857 |
Cgl0422 | Cgl1089 | cg0502 | cg1239 | Phosphate isomerase/epimerase. | SIMILAR TO KETOPANTOATE REDUCTASE; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.880 |
Cgl0422 | Cgl1826 | cg0502 | cg2047 | Phosphate isomerase/epimerase. | Putative secreted protein. | 0.856 |
Cgl0422 | azlD | cg0502 | cg3412 | Phosphate isomerase/epimerase. | Predicted branched-chain amino acid permease (azaleucine resistance). | 0.868 |
Cgl0422 | cmt4 | cg0502 | cg2394 | Phosphate isomerase/epimerase. | Corynomycolyl transferase. | 0.856 |
Cgl0422 | pks | cg0502 | cg3178 | Phosphate isomerase/epimerase. | POLYKETIDE SYNTHASE. | 0.487 |
Cgl0835 | Cgl0073 | cg0955 | cg0096 | Secreted protein. | Conserved hypothetical protein. | 0.704 |
Cgl0835 | Cgl2859 | cg0955 | cg3165 | Secreted protein. | Putative membrane protein. | 0.734 |
Cgl0835 | cmt4 | cg0955 | cg2394 | Secreted protein. | Corynomycolyl transferase. | 0.903 |
Cgl0835 | pks | cg0955 | cg3178 | Secreted protein. | POLYKETIDE SYNTHASE. | 0.606 |
Cgl1089 | Cgl0144 | cg1239 | cg0181 | SIMILAR TO KETOPANTOATE REDUCTASE; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | PUTATIVE DNA REPAIR PROTEIN. | 0.883 |
Cgl1089 | Cgl0422 | cg1239 | cg0502 | SIMILAR TO KETOPANTOATE REDUCTASE; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | Phosphate isomerase/epimerase. | 0.880 |
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