Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0782 | Cgl0827 | cg0892 | cg0947 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.540 |
Cgl0782 | Cgl1245 | cg0892 | cg1402 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.466 |
Cgl0782 | Cgl1444 | cg0892 | cg1633 | Conserved hypothetical protein. | Predicted transcriptional regulator. | 0.708 |
Cgl0782 | Cgl1900 | cg0892 | cg2080 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.689 |
Cgl0782 | Cgl1908 | cg0892 | cg2089 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.745 |
Cgl0782 | Cgl2198 | cg0892 | cg2412 | Conserved hypothetical protein. | Putative membrane protein. | 0.714 |
Cgl0782 | Cgl2210 | cg0892 | cg2424 | Conserved hypothetical protein. | Putative membrane protein. | 0.757 |
Cgl0782 | cg2132 | cg0892 | cg2132 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.671 |
Cgl0782 | rbpA | cg0892 | cg1671 | Conserved hypothetical protein. | Putative membrane-associated GTPase; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.723 |
Cgl0827 | Cgl0782 | cg0947 | cg0892 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.540 |
Cgl0827 | Cgl1119 | cg0947 | cg1270 | Conserved hypothetical protein. | PROBABLE O-METHYLTRANSFERASE. | 0.721 |
Cgl0827 | Cgl1245 | cg0947 | cg1402 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.704 |
Cgl0827 | Cgl1900 | cg0947 | cg2080 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.585 |
Cgl0827 | Cgl1908 | cg0947 | cg2089 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.567 |
Cgl0827 | Cgl2210 | cg0947 | cg2424 | Conserved hypothetical protein. | Putative membrane protein. | 0.870 |
Cgl0827 | cg2132 | cg0947 | cg2132 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.581 |
Cgl0827 | rbpA | cg0947 | cg1671 | Conserved hypothetical protein. | Putative membrane-associated GTPase; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.625 |
Cgl1119 | Cgl0827 | cg1270 | cg0947 | PROBABLE O-METHYLTRANSFERASE. | Conserved hypothetical protein. | 0.721 |
Cgl1119 | Cgl1444 | cg1270 | cg1633 | PROBABLE O-METHYLTRANSFERASE. | Predicted transcriptional regulator. | 0.437 |
Cgl1119 | Cgl1900 | cg1270 | cg2080 | PROBABLE O-METHYLTRANSFERASE. | Conserved hypothetical protein. | 0.725 |
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