STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2210Putative membrane protein. (260 aa)    
Predicted Functional Partners:
Cgl0827
Conserved hypothetical protein.
  
  
 0.870
Cgl1908
Conserved hypothetical protein.
  
    0.770
Cgl1444
Predicted transcriptional regulator.
  
    0.763
cg2132
Conserved hypothetical protein.
  
    0.761
rbpA
Putative membrane-associated GTPase; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.760
Cgl0782
Conserved hypothetical protein.
  
    0.757
Cgl1900
Conserved hypothetical protein.
  
     0.752
Cgl1245
Conserved hypothetical protein.
  
    0.723
Cgl2198
Putative membrane protein.
 
     0.717
Cgl1119
PROBABLE O-METHYLTRANSFERASE.
  
   
 0.711
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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