STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2311ALKANAL MONOOXYGENASE ALPHA CHAIN. (326 aa)    
Predicted Functional Partners:
Cgl2366
Pirin-related protein-fragment; Belongs to the pirin family.
   
  
 0.945
Cgl2368
Pirin-related protein-fragment.
   
  
 0.945
Cgl0268
Na+/H+ antiporter.
      
 0.779
Cgl3076
NADPH quinone reductase or Zn-dependent oxidoreductase.
   
  
 0.735
brnQ
Branched-Chain Amino Acid Uptake Carrier; Component of the transport system for branched-chain amino acids (leucine, isoleucine and valine) Which is coupled to a proton motive force.
  
    0.726
aecD
Cystathionine beta-Lyase.
       0.724
nanP
NEURAMINIDASE NANP.
      
 0.702
Cgl0147
CONSERVED HYPOTHETICAL PROTEIN.
   
  
 0.700
fixA
PUTATIVE ELECTRON TRANSFER FLAVOPROTEIN, BETA SUBUNIT.
      
 0.700
fdhD
FORMATE DEHYDROGENASE CHAIN D; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
   
  
 0.694
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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