STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2316Bacterial regulatory proteins, GntR family. (240 aa)    
Predicted Functional Partners:
Cgl0662
PUTATIVE GNTR-FAMILY TRANSCRIPTIONAL REGULATOR.
  
    0.775
Cgl1008
PUTATIVE GNTR-FAMILY TRANSCRIPTIONAL REGULATOR.
  
    0.773
Cgl2915
Bacterial regulatory proteins, GntR family.
  
  
 0.690
Cgl2165
Putative secreted protein.
      
 0.610
glcD
PROBABLE GLYCOLATE OXIDASE (FAD-LINKED SUBUNIT) OXIDOREDUCTASE.
     
 0.579
Cgl2314
Predicted permease.
       0.559
Cgl2313
Putative secreted or membrane protein.
  
    0.545
Cgl0554
Bacterial regulatory proteins, IclR family.
  
    0.529
Cgl3059
Bacterial regulatory proteins, IclR family.
  
    0.482
ilvN
ACETOHYDROXYACID SYNTHASE SMALL SUBUNIT.
  
    0.458
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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