STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2408Bacterial regulatory protein, LuxR family. (895 aa)    
Predicted Functional Partners:
benC
BENZOATE DIOXYGENASE REDUCTASE.
 
    0.914
benB
BENZOATE DIOXYGENASE SMALL SUBUNIT.
 
    0.904
benD
BENZOATE DIOL DEHYDROGENASE BEND; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.902
benA
BENZOATE 1,2-DIOXYGENASE ALPHA SUBUNIT (AROMATIC RING HYDROXYLATION DIOXYGENASE A).
 
    0.870
benE
BENZOATE MEMBRANE TRANSPORT PROTEIN.
 
    0.681
benK1
PUTATIVE BENZOATE TRANSPORT PROTEIN.
 
    0.662
catA1
CATECHOL 1,2-DIOXYGENASE.
  
    0.560
catC
MUCONOLACTONE ISOMERASE; Belongs to the muconolactone Delta-isomerase family.
 
    0.528
Cgl2586
PUTATIVE ACYL-COA THIOESTER HYDROLASE PROTEIN.
  
     0.509
cgtR7
Putative two component response regulator.
  
   
 0.463
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.