STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2472Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (266 aa)    
Predicted Functional Partners:
FabG
Short chain dehydrogenase, N-terminal fragment.
  
 
 0.983
ornA
Oligoribonuclease (3'->5' exoribonuclease); 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.
  
    0.831
Cgl3051
PUTATIVE OXIDOREDUCTASE PROTEIN; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.737
rbsD
Uncharacterized component of ribose/xylose transport systems; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
      
 0.725
Cgl1897
Putative membrane protein.
  
     0.650
hyi
HYDROXYPYRUVATE ISOMERASE; Belongs to the hyi family.
  
    0.616
embC
Probable arabinosyltransferase, membrane protein.
 
     0.603
pks
POLYKETIDE SYNTHASE.
 
 
 0.597
Cgl0835
Secreted protein.
  
    0.491
fabG2
PROBABLE SHORT-CHAIN DEHYDROGENASE, secreted.
  
 
 0.486
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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