STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pduOADENOSYLCOBALAMIN-DEPENDENT DIOL DEHYDRATASE GAMMA; Belongs to the Cob(I)alamin adenosyltransferase family. (190 aa)    
Predicted Functional Partners:
cobS
PUTATIVE COBALAMIN (5'-PHOSPHATE) SYNTHASE; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
    
 0.944
cobU
COBINAMIDE KINASE / COBINAMIDE PHOSPHATE GUANYLYLTRANSFERASE.
    
 0.926
Cgl1542
Glutamine amidotransferase domain.
   
  
 0.708
murA2
UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
    0.707
cobL
PRECORRIN-6Y C5,15-METHYLTRANSFERASE (DECARBOXYLATING).
     
 0.642
metH
Homocysteine Methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
   
 0.600
Cgl2796
ALDEHYDE DEHYDROGENASE; Belongs to the aldehyde dehydrogenase family.
  
  
 0.548
cobT
PROBABLE NICOTINATE-NUCLEOTIDE-- DIMETHYLBENZIMIDAZOLEPHOSPHORIBOSYLTRANSFERASE PROTEIN; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
  
 0.511
Cgl0222
PROBABLE ALCOHOL DEHYDROGENASE.
     
  0.499
hemD
UROPORPHYRINOGEN III SYNTHASE/METHYLTRANSFERASE.
 
  
 0.491
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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