Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl1203 | Cgl2612 | cg1359 | cg2894 | Membrane protein, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-pho. | Bacterial regulatory protein, TetR family. | 0.459 |
Cgl1580 | Cgl2611 | cg1782 | cg2893 | Transposase. | Permease of the major facilitator superfamily. | 0.477 |
Cgl1580 | Cgl2612 | cg1782 | cg2894 | Transposase. | Bacterial regulatory protein, TetR family. | 0.568 |
Cgl1580 | cg2808 | cg1782 | cg2808 | Transposase. | Transposase. | 0.923 |
Cgl1992 | Cgl2611 | cg2183 | cg2893 | ABC-type peptide transport system, permease component. | Permease of the major facilitator superfamily. | 0.475 |
Cgl1992 | Cgl2612 | cg2183 | cg2894 | ABC-type peptide transport system, permease component. | Bacterial regulatory protein, TetR family. | 0.476 |
Cgl2611 | Cgl1580 | cg2893 | cg1782 | Permease of the major facilitator superfamily. | Transposase. | 0.477 |
Cgl2611 | Cgl1992 | cg2893 | cg2183 | Permease of the major facilitator superfamily. | ABC-type peptide transport system, permease component. | 0.475 |
Cgl2611 | Cgl2612 | cg2893 | cg2894 | Permease of the major facilitator superfamily. | Bacterial regulatory protein, TetR family. | 0.998 |
Cgl2611 | Cgl2613 | cg2893 | cg2895 | Permease of the major facilitator superfamily. | Permease of the major facilitator superfamily. | 0.799 |
Cgl2611 | cg2808 | cg2893 | cg2808 | Permease of the major facilitator superfamily. | Transposase. | 0.856 |
Cgl2612 | Cgl1203 | cg2894 | cg1359 | Bacterial regulatory protein, TetR family. | Membrane protein, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-pho. | 0.459 |
Cgl2612 | Cgl1580 | cg2894 | cg1782 | Bacterial regulatory protein, TetR family. | Transposase. | 0.568 |
Cgl2612 | Cgl1992 | cg2894 | cg2183 | Bacterial regulatory protein, TetR family. | ABC-type peptide transport system, permease component. | 0.476 |
Cgl2612 | Cgl2611 | cg2894 | cg2893 | Bacterial regulatory protein, TetR family. | Permease of the major facilitator superfamily. | 0.998 |
Cgl2612 | Cgl2613 | cg2894 | cg2895 | Bacterial regulatory protein, TetR family. | Permease of the major facilitator superfamily. | 0.795 |
Cgl2612 | amtR | cg2894 | cg0986 | Bacterial regulatory protein, TetR family. | AMTR PROTEIN. | 0.608 |
Cgl2612 | cg2808 | cg2894 | cg2808 | Bacterial regulatory protein, TetR family. | Transposase. | 0.879 |
Cgl2612 | poxB | cg2894 | cg2891 | Bacterial regulatory protein, TetR family. | PYRUVATE DEHYDROGENASE; Belongs to the TPP enzyme family. | 0.408 |
Cgl2612 | priP | cg2894 | cg1959 | Bacterial regulatory protein, TetR family. | PROPHAGE DNA PRIMASE. | 0.418 |
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