Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl2135 | Cgl2793 | cg2343 | cg3093 | Decarboxylase. | Carbon-nitrogen hydrolase. | 0.440 |
Cgl2135 | gabT | cg2343 | cg0566 | Decarboxylase. | PROBABLE 4-AMINOBUTYRATE AMINOTRANSFERASE PROTEIN; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.717 |
Cgl2793 | Cgl2135 | cg3093 | cg2343 | Carbon-nitrogen hydrolase. | Decarboxylase. | 0.440 |
Cgl2793 | Cgl2794 | cg3093 | cg3094 | Carbon-nitrogen hydrolase. | Hypothetical protein predicted by Glimmer/Critica. | 0.547 |
Cgl2793 | Cgl2795 | cg3093 | cg3095 | Carbon-nitrogen hydrolase. | Conserved hypothetical protein. | 0.596 |
Cgl2793 | Cgl2929 | cg3093 | cg3240 | Carbon-nitrogen hydrolase. | Permease of the major facilitator superfamily. | 0.539 |
Cgl2793 | apt | cg3093 | cg1862 | Carbon-nitrogen hydrolase. | ADENINE PHOSPHORIBOSYLTRANSFERASE; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.626 |
Cgl2793 | gabT | cg3093 | cg0566 | Carbon-nitrogen hydrolase. | PROBABLE 4-AMINOBUTYRATE AMINOTRANSFERASE PROTEIN; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.857 |
Cgl2793 | guaA | cg3093 | cg0703 | Carbon-nitrogen hydrolase. | PUTATIVE GMP SYNTHASE; Catalyzes the synthesis of GMP from XMP. | 0.457 |
Cgl2793 | ssiE | cg3093 | cg1151 | Carbon-nitrogen hydrolase. | PUTATIVE MONOOXYGENASE. | 0.534 |
Cgl2793 | ssiF | cg3093 | cg1152 | Carbon-nitrogen hydrolase. | PUTATIVE MONOXYGENASE. | 0.464 |
Cgl2794 | Cgl2793 | cg3094 | cg3093 | Hypothetical protein predicted by Glimmer/Critica. | Carbon-nitrogen hydrolase. | 0.547 |
Cgl2794 | Cgl2795 | cg3094 | cg3095 | Hypothetical protein predicted by Glimmer/Critica. | Conserved hypothetical protein. | 0.783 |
Cgl2795 | Cgl2793 | cg3095 | cg3093 | Conserved hypothetical protein. | Carbon-nitrogen hydrolase. | 0.596 |
Cgl2795 | Cgl2794 | cg3095 | cg3094 | Conserved hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.783 |
Cgl2929 | Cgl2793 | cg3240 | cg3093 | Permease of the major facilitator superfamily. | Carbon-nitrogen hydrolase. | 0.539 |
apt | Cgl2793 | cg1862 | cg3093 | ADENINE PHOSPHORIBOSYLTRANSFERASE; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Carbon-nitrogen hydrolase. | 0.626 |
apt | guaA | cg1862 | cg0703 | ADENINE PHOSPHORIBOSYLTRANSFERASE; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | PUTATIVE GMP SYNTHASE; Catalyzes the synthesis of GMP from XMP. | 0.993 |
gabT | Cgl2135 | cg0566 | cg2343 | PROBABLE 4-AMINOBUTYRATE AMINOTRANSFERASE PROTEIN; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Decarboxylase. | 0.717 |
gabT | Cgl2793 | cg0566 | cg3093 | PROBABLE 4-AMINOBUTYRATE AMINOTRANSFERASE PROTEIN; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Carbon-nitrogen hydrolase. | 0.857 |
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