STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pccBPROPIONYL-COA CARBOXYLASE BETA CHAIN. (516 aa)    
Predicted Functional Partners:
accBC
BIOTIN CARBOXYLASE AND BIOTIN CARBOXYL CARRIER PROTEIN.
 
 0.995
pks
POLYKETIDE SYNTHASE.
  
  
 0.948
pyc
PYRUVATE CARBOXYLASE; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
 
 0.912
Cgl0706
Conserved hypothetical protein.
  
  
 0.819
birA
BIFUNCTIONAL BIOTIN LIGASE/BIOTIN OPERON REPRESSOR.
 
 
 0.796
fas-IA
FATTY ACID SYNTHASE.
  
  
 0.782
fas-IB
FATTY ACID SYNTHASE.
  
  
 0.781
fadD2
PUTATIVE ACYL-COA SYNTHETASE.
  
 
 0.667
Cgl1217
Glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein.
 
  
 0.633
Cgl2873
Putative secreted protein.
  
  
 0.494
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.