Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0189 | Cgl0190 | cg0237 | cg0238 | PUTATIVE OXIDOREDUCTASE. | L-GULONOLACTONE OXIDASE. | 0.985 |
Cgl0189 | Cgl0195 | cg0237 | cg0243 | PUTATIVE OXIDOREDUCTASE. | Membrane protein. | 0.860 |
Cgl0189 | Cgl2880 | cg0237 | cg3189 | PUTATIVE OXIDOREDUCTASE. | 4-hydroxybenzoate polyprenyltransferase or related prenyltransferase; Involved in the biosynthesis of decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis. Catalyzes the transfer of a 5-phosphoribosyl residue from phosphoribose diphosphate (pRpp) to decaprenyl phosphate (DP) to form decaprenylphosphoryl-5-phosphoribose (DPPR). | 0.848 |
Cgl0189 | Cgl2881 | cg0237 | cg3190 | PUTATIVE OXIDOREDUCTASE. | Membrane-associated phospholipid phosphatase. | 0.844 |
Cgl0189 | aftA | cg0237 | cg0236 | PUTATIVE OXIDOREDUCTASE. | Membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the cell wall. Catalyzes the addition of the first key arabinofuranosyl (Araf) residue from the sugar donor decaprenyl-phospho-arabinose (DPA) on the C-5 of a 6-linked galactofuranosyl (Galf) of the galactan domain, thus 'priming' the galactan for further elaboration by other arabinofuranosyltransferases (By similarity). | 0.914 |
Cgl0189 | aftB | cg0237 | cg3187 | PUTATIVE OXIDOREDUCTASE. | Putative membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the cell wall. Catalyzes the transfer of arabinofuranosyl (Araf) residues from the sugar donor decaprenyl- phospho-arabinose (DPA) to the arabinan domain to form terminal beta- (1->2)-linked Araf residues, which marks the end point for AG arabinan biosynthesis before decoration with mycolic acids. Belongs to the AftB family. | 0.406 |
Cgl0189 | crtEb | cg0237 | cg0717 | PUTATIVE OXIDOREDUCTASE. | LYCOPENE ELONGASE. | 0.617 |
Cgl0190 | Cgl0189 | cg0238 | cg0237 | L-GULONOLACTONE OXIDASE. | PUTATIVE OXIDOREDUCTASE. | 0.985 |
Cgl0190 | Cgl0195 | cg0238 | cg0243 | L-GULONOLACTONE OXIDASE. | Membrane protein. | 0.879 |
Cgl0190 | Cgl1486 | cg0238 | cg1680 | L-GULONOLACTONE OXIDASE. | Short-chain dehydrogenase/reductase. | 0.784 |
Cgl0190 | Cgl2880 | cg0238 | cg3189 | L-GULONOLACTONE OXIDASE. | 4-hydroxybenzoate polyprenyltransferase or related prenyltransferase; Involved in the biosynthesis of decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis. Catalyzes the transfer of a 5-phosphoribosyl residue from phosphoribose diphosphate (pRpp) to decaprenyl phosphate (DP) to form decaprenylphosphoryl-5-phosphoribose (DPPR). | 0.872 |
Cgl0190 | Cgl2881 | cg0238 | cg3190 | L-GULONOLACTONE OXIDASE. | Membrane-associated phospholipid phosphatase. | 0.452 |
Cgl0190 | aftA | cg0238 | cg0236 | L-GULONOLACTONE OXIDASE. | Membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the cell wall. Catalyzes the addition of the first key arabinofuranosyl (Araf) residue from the sugar donor decaprenyl-phospho-arabinose (DPA) on the C-5 of a 6-linked galactofuranosyl (Galf) of the galactan domain, thus 'priming' the galactan for further elaboration by other arabinofuranosyltransferases (By similarity). | 0.633 |
Cgl0195 | Cgl0189 | cg0243 | cg0237 | Membrane protein. | PUTATIVE OXIDOREDUCTASE. | 0.860 |
Cgl0195 | Cgl0190 | cg0243 | cg0238 | Membrane protein. | L-GULONOLACTONE OXIDASE. | 0.879 |
Cgl0195 | Cgl1486 | cg0243 | cg1680 | Membrane protein. | Short-chain dehydrogenase/reductase. | 0.671 |
Cgl0195 | Cgl2880 | cg0243 | cg3189 | Membrane protein. | 4-hydroxybenzoate polyprenyltransferase or related prenyltransferase; Involved in the biosynthesis of decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis. Catalyzes the transfer of a 5-phosphoribosyl residue from phosphoribose diphosphate (pRpp) to decaprenyl phosphate (DP) to form decaprenylphosphoryl-5-phosphoribose (DPPR). | 0.721 |
Cgl0195 | Cgl2881 | cg0243 | cg3190 | Membrane protein. | Membrane-associated phospholipid phosphatase. | 0.461 |
Cgl0195 | aftA | cg0243 | cg0236 | Membrane protein. | Membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the cell wall. Catalyzes the addition of the first key arabinofuranosyl (Araf) residue from the sugar donor decaprenyl-phospho-arabinose (DPA) on the C-5 of a 6-linked galactofuranosyl (Galf) of the galactan domain, thus 'priming' the galactan for further elaboration by other arabinofuranosyltransferases (By similarity). | 0.409 |
Cgl0195 | aftB | cg0243 | cg3187 | Membrane protein. | Putative membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the cell wall. Catalyzes the transfer of arabinofuranosyl (Araf) residues from the sugar donor decaprenyl- phospho-arabinose (DPA) to the arabinan domain to form terminal beta- (1->2)-linked Araf residues, which marks the end point for AG arabinan biosynthesis before decoration with mycolic acids. Belongs to the AftB family. | 0.691 |
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