STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2894Bacterial regulatory proteins, GntR family. (266 aa)    
Predicted Functional Partners:
Cgl0446
Putative secreted protein.
   
    0.853
Cgl2895
Conserved hypothetical protein.
  
    0.815
Cgl1235
TRANSCRIPTIONAL REGULATOR, CRO/CI FAMILY.
   
  
 0.813
cgtS4
Probable two component sensor kinase.
   
  
 0.800
Cgl2394
ATP-dependent transcriptional regulator, LuxR family.
   
  
 0.797
Cgl1820
Putative transcriptional regulator.
   
  
 0.791
Cgl2896
Conserved hypothetical protein.
       0.790
Cgl2445
Bacterial regulatory proteins, TetR family.
   
  
 0.784
cgtR6
Putative two component response regulator.
   
  
 0.784
Cgl1931
Transcriptional regulators of sugar metabolism, DeoR family.
  
  
 0.740
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.