Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0642 | Cgl2939 | cg0742 | cg3251 | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | Putative sortase (surface protein transpeptidase). | 0.487 |
Cgl0785 | Cgl2939 | cg0895 | cg3251 | Conserved hypothetical protein. | Putative sortase (surface protein transpeptidase). | 0.488 |
Cgl1445 | Cgl2210 | cg1635 | cg2424 | Putative membrane protein. | Putative membrane protein. | 0.430 |
Cgl1445 | Cgl2939 | cg1635 | cg3251 | Putative membrane protein. | Putative sortase (surface protein transpeptidase). | 0.517 |
Cgl2210 | Cgl1445 | cg2424 | cg1635 | Putative membrane protein. | Putative membrane protein. | 0.430 |
Cgl2210 | Cgl2939 | cg2424 | cg3251 | Putative membrane protein. | Putative sortase (surface protein transpeptidase). | 0.550 |
Cgl2210 | cg0496 | cg2424 | cg0496 | Putative membrane protein. | Thiol-disulfide isomerase or thioredoxin. | 0.419 |
Cgl2938 | Cgl2939 | cg3250 | cg3251 | Putative membrane protein. | Putative sortase (surface protein transpeptidase). | 0.859 |
Cgl2938 | yidC | cg3250 | cg3252 | Putative membrane protein. | Putative preprotein translocase subunit YidC, SpoIIIJ homolog; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (By similarity). | 0.625 |
Cgl2939 | Cgl0642 | cg3251 | cg0742 | Putative sortase (surface protein transpeptidase). | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | 0.487 |
Cgl2939 | Cgl0785 | cg3251 | cg0895 | Putative sortase (surface protein transpeptidase). | Conserved hypothetical protein. | 0.488 |
Cgl2939 | Cgl1445 | cg3251 | cg1635 | Putative sortase (surface protein transpeptidase). | Putative membrane protein. | 0.517 |
Cgl2939 | Cgl2210 | cg3251 | cg2424 | Putative sortase (surface protein transpeptidase). | Putative membrane protein. | 0.550 |
Cgl2939 | Cgl2938 | cg3251 | cg3250 | Putative sortase (surface protein transpeptidase). | Putative membrane protein. | 0.859 |
Cgl2939 | cg0496 | cg3251 | cg0496 | Putative sortase (surface protein transpeptidase). | Thiol-disulfide isomerase or thioredoxin. | 0.668 |
Cgl2939 | groEL-2 | cg3251 | cg0693 | Putative sortase (surface protein transpeptidase). | 60 KDA CHAPERONIN (PROTEIN CPN60) (GROEL PROTEIN) C-terminal fragment; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.468 |
Cgl2939 | groEL-3 | cg3251 | cg3011 | Putative sortase (surface protein transpeptidase). | Chaperonin cpn60 (60Kd subunit); Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.468 |
Cgl2939 | secA | cg3251 | cg0868 | Putative sortase (surface protein transpeptidase). | PREPROTEIN TRANSLOCASE SUBUNIT SECA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.508 |
Cgl2939 | yidC | cg3251 | cg3252 | Putative sortase (surface protein transpeptidase). | Putative preprotein translocase subunit YidC, SpoIIIJ homolog; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (By similarity). | 0.804 |
cg0496 | Cgl2210 | cg0496 | cg2424 | Thiol-disulfide isomerase or thioredoxin. | Putative membrane protein. | 0.419 |
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