STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uspA3UNIVERSAL STRESS PROTEIN FAMILY. (301 aa)    
Predicted Functional Partners:
fdxA
FERREDOXIN; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
   
  
 0.704
rluC2
Putative ribosomal pseudouridine synthase.
  
    0.524
uspA1
Universal stress protein UspA and related nucleotide-binding proteins.
  
   
 0.502
Cgl2944
ALKANAL MONOOXYGENASE ALPHA CHAIN.
  
    0.498
Cgl1237
Putative spermidine synthase.
 
    
 0.470
rpf1
PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity).
      
 0.462
Cgl2853
Universal stress protein UspA or related nucleotide-binding proteins.
  
  
 0.459
hpf
Ribosome-associated protein Y (PSrp-1); Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
  
 0.436
cg3257
Conserved hypothetical protein.
       0.409
ptpA2
Low molecular weight phosphotyrosine protein phosp.
   
  
 0.408
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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