Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0335 | Cgl0548 | cg0404 | cg0639 | Nitroreductase family. | FERREDOXIN REDUCTASE. | 0.710 |
Cgl0335 | Cgl3016 | cg0404 | cg3344 | Nitroreductase family. | Nitroreductase. | 0.485 |
Cgl0335 | gltB | cg0404 | cg0229 | Nitroreductase family. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | 0.514 |
Cgl0548 | Cgl0335 | cg0639 | cg0404 | FERREDOXIN REDUCTASE. | Nitroreductase family. | 0.710 |
Cgl0548 | Cgl3016 | cg0639 | cg3344 | FERREDOXIN REDUCTASE. | Nitroreductase. | 0.798 |
Cgl0548 | gltB | cg0639 | cg0229 | FERREDOXIN REDUCTASE. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | 0.571 |
Cgl2901 | Cgl3016 | cg3209 | cg3344 | Predicted metal-dependent membrane protease. | Nitroreductase. | 0.454 |
Cgl3015 | Cgl3016 | cg3343 | cg3344 | Putative secreted membrane protein. | Nitroreductase. | 0.482 |
Cgl3016 | Cgl0335 | cg3344 | cg0404 | Nitroreductase. | Nitroreductase family. | 0.485 |
Cgl3016 | Cgl0548 | cg3344 | cg0639 | Nitroreductase. | FERREDOXIN REDUCTASE. | 0.798 |
Cgl3016 | Cgl2901 | cg3344 | cg3209 | Nitroreductase. | Predicted metal-dependent membrane protease. | 0.454 |
Cgl3016 | Cgl3015 | cg3344 | cg3343 | Nitroreductase. | Putative secreted membrane protein. | 0.482 |
Cgl3016 | Cgl3017 | cg3344 | cg3345 | Nitroreductase. | Hypothetical protein predicted by Glimmer/Critica. | 0.988 |
Cgl3016 | gltB | cg3344 | cg0229 | Nitroreductase. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | 0.507 |
Cgl3016 | pup | cg3344 | cg1689 | Nitroreductase. | Conserved hypothetical protein; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family. | 0.452 |
Cgl3017 | Cgl3016 | cg3345 | cg3344 | Hypothetical protein predicted by Glimmer/Critica. | Nitroreductase. | 0.988 |
Cgl3017 | pup | cg3345 | cg1689 | Hypothetical protein predicted by Glimmer/Critica. | Conserved hypothetical protein; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family. | 0.535 |
gltB | Cgl0335 | cg0229 | cg0404 | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | Nitroreductase family. | 0.514 |
gltB | Cgl0548 | cg0229 | cg0639 | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | FERREDOXIN REDUCTASE. | 0.571 |
gltB | Cgl3016 | cg0229 | cg3344 | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | Nitroreductase. | 0.507 |
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