STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl3060Predicted dehydrogenase. (359 aa)    
Predicted Functional Partners:
idhA2
MYO-INOSITOL 2-DEHYDROGENASE.
 
  
 0.964
idhA1
MYO-INOSITOL 2-DEHYDROGENASE.
 
    0.893
Cgl3061
Sugar phosphate isomerase/epimerase.
 
    0.853
Cgl1260
Putative dinucleotide-binding enzyme.
     
 0.803
Cgl0032
PROBABLE ABC TRANSPORT PROTEIN, ATP-BINDING COMPON.
  
  
 0.802
Cgl0030
PROBABLE SOLUTE-BINDING LIPOPROTEIN, signal peptide.
  
  
 0.799
Cgl0451
PUTATIVE INTEGRAL MEMBRANE PROTEIN.
   
  
 0.797
Cgl0531
PUTATIVE INTEGRAL MEMBRANE PROTEIN.
      
 0.797
Cgl2614
Putative secreted protein, hypothetical endoglucanase.
      
 0.797
Cgl1993
ATPase component of peptide ABC-type transport system, contains duplicated ATPase domains; Belongs to the ABC transporter superfamily.
      
 0.774
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.