STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl3086NTP pyrophosphohydrolase; Belongs to the Nudix hydrolase family. (176 aa)    
Predicted Functional Partners:
Cgl3087
Putative secreted protein.
  
 0.931
Cgl3088
Uncharacterized membrane protein, virulence factor homolog.
       0.582
cg3416
Putative membrane protein.
       0.547
Cgl1956
Conserved hypothetical protein.
  
   
 0.545
Cgl1916
Conserved hypothetical protein.
  
     0.506
cwlM
N-ACETYMURAMYL-L-ALANINE AMIDASE.
 
     0.506
sigM
RNA POLYMERASE SIGMA-70 FACTOR, ECF SUBFAMILY.
  
    0.482
Cgl2450
Conserved hypothetical protein.
  
     0.463
Cgl1318
NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
  
 0.449
trxB
THIOREDOXIN REDUCTASE.
     
 0.448
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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