STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tll0007Cellulose synthase; ORF_ID:tll0007. (736 aa)    
Predicted Functional Partners:
tlr0903
ORF_ID:tlr0903; unknown protein.
 
  
 0.919
tlr1210
GGDEF family protein; ORF_ID:tlr1210.
  
  
 0.913
tlr1612
ORF_ID:tlr1612; hypothetical protein.
  
  
 0.892
tlr1902
Beta-xylanase; ORF_ID:tlr1902; probable endo-1,4-beta-xylanase.
     
 0.885
tlr1605
ORF_ID:tlr1605; probable outer membrane efflux protein.
      
 0.879
tll1049
Two-component response regulator; ORF_ID:tll1049.
  
  
 0.810
tll1859
ORF_ID:tll1859; hypothetical protein.
  
  
 0.793
tll0627
ORF_ID:tll0627; hypothetical protein.
  
  
 0.723
ycf81
Ycf81 protein; ORF_ID:tll0008; hypothetical protein.
       0.693
tlr1158
ORF_ID:tlr1158; hypothetical protein.
  
  
 0.633
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.