tll0480 protein (Thermosynechococcus elongatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

tll0480

Two-component sensor histidine kinase (710 aa)

Predicted Functional Partners:

glnB

0.892

nadK2

0.769

glsF

0.754

thiE

0.748

tll2099

0.735

tlr1215

0.731

tll2446

0.713

tlr2423

0.695

tlr0589

0.695

tll2364

0.695

Your Current Organism:

Thermosynechococcus elongatus

NCBI taxonomy Id: 197221
Other names: T. elongatus, T. elongatus BP-1, Thermosynechococcus, Thermosynechococcus elongatus, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
glnB	glsF	tll0591	tll1368	Nitrogen regulatory protein P-II	Ferredoxin-dependent glutamate synthase	0.976
glnB	tll0480	tll0591	tll0480	Nitrogen regulatory protein P-II	Two-component sensor histidine kinase	0.892
glsF	glnB	tll1368	tll0591	Ferredoxin-dependent glutamate synthase	Nitrogen regulatory protein P-II	0.976
glsF	thiE	tll1368	tlr1947	Ferredoxin-dependent glutamate synthase	Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)	0.531
glsF	tll0480	tll1368	tll0480	Ferredoxin-dependent glutamate synthase	Two-component sensor histidine kinase	0.754
nadK2	tll0480	tlr0484	tll0480	Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP	Two-component sensor histidine kinase	0.769
nadK2	tll2099	tlr0484	tll2099	Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP	Two-component response regulator	0.731
nadK2	tll2364	tlr0484	tll2364	Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP	Two-component response regulator	0.731
nadK2	tlr0589	tlr0484	tlr0589	Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP	Two-component response regulator	0.760
nadK2	tlr2423	tlr0484	tlr2423	Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP	Two-component response regulator	0.731
thiE	glsF	tlr1947	tll1368	Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)	Ferredoxin-dependent glutamate synthase	0.531
thiE	tll0480	tlr1947	tll0480	Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)	Two-component sensor histidine kinase	0.748
tll0480	glnB	tll0480	tll0591	Two-component sensor histidine kinase	Nitrogen regulatory protein P-II	0.892
tll0480	glsF	tll0480	tll1368	Two-component sensor histidine kinase	Ferredoxin-dependent glutamate synthase	0.754
tll0480	nadK2	tll0480	tlr0484	Two-component sensor histidine kinase	Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP	0.769
tll0480	thiE	tll0480	tlr1947	Two-component sensor histidine kinase	Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)	0.748
tll0480	tll2099	tll0480	tll2099	Two-component sensor histidine kinase	Two-component response regulator	0.735
tll0480	tll2364	tll0480	tll2364	Two-component sensor histidine kinase	Two-component response regulator	0.695
tll0480	tll2446	tll0480	tll2446	Two-component sensor histidine kinase	Two-component response regulator	0.713
tll0480	tlr0589	tll0480	tlr0589	Two-component sensor histidine kinase	Two-component response regulator	0.695

page 1 of 3

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2017

Credits

Access

Info

About