STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apcAAllophycocyanin alpha subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. (161 aa)    
Predicted Functional Partners:
apcC
Phycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer (By similarity).
 
 
 
 0.999
apcB
Allophycocyanin beta subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers.
 
 
 
0.999
cpcG4
Phycobilisome 30kDa rod-core linker polypeptide; Rod-core linker protein required for attachment of phycocyanin to allophycocyanin in cores of phycobilisomes.
  
 
 
 0.993
apcE
Phycobilisome core-membrane linker polypeptide; ORF_ID:tll2365; Belongs to the phycobilisome linker protein family.
 
 
 
0.992
cpcC
Phycobilisome rod linker polypeptide; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.991
apcF
Phycobilisome core component; ORF_ID:tlr2034.
  
 
 
0.987
cpcA
Phycocyanin alpha subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
  
 
 
0.972
cpcG1
Phycobilisome 31kDa rod-core linker polypeptide; Rod-core linker protein required for attachment of phycocyanin to allophycocyanin in cores of phycobilisomes.
  
 
 
 0.965
cpcB
Phycocyanin beta subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
  
 
 
0.964
ycf58
Chromophore lyase CpcS/CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.962
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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