STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tll1486ORF_ID:tll1486; putative transposase. (479 aa)    
Predicted Functional Partners:
tll1487
ORF_ID:tll1487; hypothetical protein.
  
   0.806
tll1488
FraH protein homolog; ORF_ID:tll1488.
   
   0.670
tll1329
ABC transporter ATP-binding protein; ORF_ID:tll1329.
  
 
 0.504
tlr1491
Penicillin-binding protein; ORF_ID:tlr1491.
   
 
 0.437
tll1831
Two-component sensor histidine kinase; ORF_ID:tll1831.
   
 
 0.435
tll0627
ORF_ID:tll0627; hypothetical protein.
  
 
 0.428
tlr1253
ABC transporter ATP-binding protein; ORF_ID:tlr1253.
  
 
 0.423
tll1340
ABC transporter ATP-binding protein; ORF_ID:tll1340.
  
 
 0.423
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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