tlr1120 protein (Thermosynechococcus elongatus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

tlr1120

ABC transporter substrate-binding protein (437 aa)

Predicted Functional Partners:

tlr1121

0.998

tlr1124

0.997

tlr1122

0.997

tlr1123

0.996

tlr1679

0.890

tlr1592

0.890

tlr2006

0.858

tlr0053

0.858

tll2114

0.850

tll1318

0.850

Your Current Organism:

Thermosynechococcus elongatus

NCBI taxonomy Id: 197221
Other names: T. elongatus, T. elongatus BP-1, Thermosynechococcus, Thermosynechococcus elongatus, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
tll1318	tlr0053	Branched-chain amino acid ABC transporter ATP-binding protein	Branched-chain amino acid ABC transporter ATP-binding protein	0.986
tll1318	tlr1120	Branched-chain amino acid ABC transporter ATP-binding protein	ABC transporter substrate-binding protein	0.850
tll1318	tlr1121	Branched-chain amino acid ABC transporter ATP-binding protein	ABC transporter permease	0.841
tll1318	tlr1122	Branched-chain amino acid ABC transporter ATP-binding protein	ABC transporter permease	0.896
tll1318	tlr1123	Branched-chain amino acid ABC transporter ATP-binding protein	ABC transporter ATP-binding protein	0.736
tll1318	tlr1124	Branched-chain amino acid ABC transporter ATP-binding protein	Branched chain ABC transporter ATP-binding protein	0.917
tll1318	tlr1592	Branched-chain amino acid ABC transporter ATP-binding protein	Branched-chain amino acid ABC transporter permease	0.995
tll1318	tlr1679	Branched-chain amino acid ABC transporter ATP-binding protein	Branched-chain amino acid ABC transporter permease	0.965
tll1318	tlr2006	Branched-chain amino acid ABC transporter ATP-binding protein	Branched-chain amino acid ABC transporter ATP-binding protein	0.933
tll2114	tlr0053	Branched-chain amino acid ABC transporter ATP-binding protein	Branched-chain amino acid ABC transporter ATP-binding protein	0.932
tll2114	tlr1120	Branched-chain amino acid ABC transporter ATP-binding protein	ABC transporter substrate-binding protein	0.850
tll2114	tlr1121	Branched-chain amino acid ABC transporter ATP-binding protein	ABC transporter permease	0.862
tll2114	tlr1122	Branched-chain amino acid ABC transporter ATP-binding protein	ABC transporter permease	0.909
tll2114	tlr1123	Branched-chain amino acid ABC transporter ATP-binding protein	ABC transporter ATP-binding protein	0.736
tll2114	tlr1124	Branched-chain amino acid ABC transporter ATP-binding protein	Branched chain ABC transporter ATP-binding protein	0.922
tll2114	tlr1592	Branched-chain amino acid ABC transporter ATP-binding protein	Branched-chain amino acid ABC transporter permease	0.975
tll2114	tlr1679	Branched-chain amino acid ABC transporter ATP-binding protein	Branched-chain amino acid ABC transporter permease	0.995
tll2114	tlr2006	Branched-chain amino acid ABC transporter ATP-binding protein	Branched-chain amino acid ABC transporter ATP-binding protein	0.985
tlr0053	tll1318	Branched-chain amino acid ABC transporter ATP-binding protein	Branched-chain amino acid ABC transporter ATP-binding protein	0.986
tlr0053	tll2114	Branched-chain amino acid ABC transporter ATP-binding protein	Branched-chain amino acid ABC transporter ATP-binding protein	0.932

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