STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlr1795ORF_ID:tlr1795; similar to cellulose synthase. (722 aa)    
Predicted Functional Partners:
tlr1794
ORF_ID:tlr1794; unknown protein.
 
    0.879
tlr1612
ORF_ID:tlr1612; hypothetical protein.
  
  
 0.556
tlr0924
ORF_ID:tlr0924; hypothetical protein.
 
    0.497
tll1033
Polysaccharide deacetylase; ORF_ID:tll1033.
 
  
 0.487
tll0627
ORF_ID:tll0627; hypothetical protein.
  
  
 0.485
tlr1271
ORF_ID:tlr1271; unknown protein.
  
 
 0.430
tlr1793
SpoU rRNA Methylase family; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.405
tll0369
ORF_ID:tll0369; probable glycosyltransferase.
  
 
 0.401
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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