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rpsU protein (Thermosynechococcus elongatus) - STRING interaction network
"rpsU" - 30S ribosomal protein S21 in Thermosynechococcus elongatus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
rpsU30S ribosomal protein S21 (57 aa)    
Predicted Functional Partners:
rpsP
30S ribosomal protein S16 (83 aa)
   
  0.992
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (130 aa)
   
  0.966
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (175 aa)
     
  0.965
rpsO
30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA (89 aa)
     
  0.963
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (71 aa)
   
  0.961
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (98 aa)
   
  0.960
rps6
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (114 aa)
   
  0.953
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy (134 aa)
     
  0.951
rps9
30S ribosomal protein S9 (137 aa)
     
  0.947
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (104 aa)
     
  0.946
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus, T. elongatus BP-1, Thermosynechococcus, Thermosynechococcus elongatus, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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