STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002105465_02766Unannotated protein. (305 aa)    
Predicted Functional Partners:
GCA_002105465_01497
Unannotated protein.
 
      0.900
GCA_002105465_03370
Unannotated protein.
  
 
  0.733
GCA_002105465_02883
Unannotated protein.
  
 
  0.717
GCA_002105465_02767
Unannotated protein.
       0.714
GCA_002105465_00538
Unannotated protein.
    
  0.686
GCA_002105465_01753
Unannotated protein.
    
  0.671
GCA_002105465_03053
Unannotated protein.
    
  0.671
GCA_002105465_01488
Unannotated protein.
    
 0.669
GCA_002105465_01688
Unannotated protein.
   
 
  0.664
GCA_002105465_02323
Unannotated protein.
   
 
  0.662
Your Current Organism:
Aquidulcibacter paucihalophilus
NCBI taxonomy Id: 1978549
Other names: A. paucihalophilus, Aquidulcibacter paucihalophilus Cai et al. 2018, CGMCC 1.12979, Caulobacteraceae bacterium TH1-2, LMG 28362, LMG:28362, alpha proteobacterium 1-2, strain TH1-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.