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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11836.1Nitroreductase. (246 aa)    
Predicted Functional Partners:
AKU11837.1
acyl-CoA dehydrogenase.
     
 0.776
bzdR
BzdR; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
   
 0.614
AKU10479.1
biotin--acetyl-CoA-carboxylase ligase.
  
    0.609
AKU10934.1
Hypothetical protein.
  
  
 0.524
AKU11206.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.497
AKU12426.1
Putative acyl-CoA dehydrogenase.
  
   
 0.494
AKU14233.1
Hypothetical protein.
  
  
 0.494
AKU11612.1
ABC-2 type transporter.
 
  
 0.475
AKU11839.1
Putative 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase.
  
   0.472
menB
2-ketocyclohexanecarboxyl-CoA hydrolase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
       0.468
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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