STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM99430.1Octopine transport system permease protein occQ; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, transporter activity and transport. (240 aa)    
Predicted Functional Partners:
ADM99428.1
ATP-binding component of histidine transport; Protein involved in ATP binding, ATPase activity, nucleotide binding, nucleoside-triphosphatase activity, amino acid catabolic process and amide transport.
 
 
 0.992
ADM99431.1
ABC transporter, periplasmic binding-protein; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, transporter activity, aminoacyl-tRNA ligase activity, ATP binding, transport and tRNA aminoacylation for protein translation.
  0.992
ADM99429.1
Octopine transport system permease protein occM; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, transporter activity and transport.
 
 
0.973
ADM99427.1
Histidine ammonia-lyase; Feature ID 17150 is homologous to 17139; Protein involved in ammonia ligase activity, histidine ammonia-lyase activity, biosynthetic process and histidine catabolic process.
      0.852
ADM99758.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, transporter activity and transport.
 
  
  0.838
hisP
Histidine/lysine/arginine/ornithine transporter subunit; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, ATP binding, ATPase activity, nucleotide binding, nucleoside-triphosphatase activity, lysine biosynthetic process via diaminopimelate, arginine biosynthetic process, histidine biosynthetic process and amino acid catabolic process.
 
  
 0.825
artJ
Arginine-binding periplasmic protein 2 precursor; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, ionotropic glutamate receptor activity, extracellular-glutamate-gated ion channel activity, transporter activity, arginine biosynthetic process and transport; Belongs to the bacterial solute-binding protein 3 family.
   0.794
artI
Periplasmic-binding component of an ABC superfamily arginine transporter; Missing the N-terminal ca 150aa; Protein involved in ionotropic glutamate receptor activity, extracellular-glutamate-gated ion channel activity, transporter activity and transport; Belongs to the bacterial solute-binding protein 3 family.
   0.793
hisJ
Periplasmic-binding component of an ABC superfamily histidine/lysine/arginine/ornithine transporter; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, transporter activity, histidine biosynthetic process and transport; Belongs to the bacterial solute-binding protein 3 family.
   0.784
ADM99210.1
Lysine-arginine-ornithine-binding periplasmic protein; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, transporter activity, amino acid biosynthetic process and transport; Belongs to the bacterial solute-binding protein 3 family.
 
   0.782
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.