STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcpAHcp; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown (172 aa)    
Predicted Functional Partners:
ADM97678.1
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown
 
 
 0.927
vgrGA
Putative type VI secretion system protein VgrGA; A Vgr protein that is probably part of a type VI secretion system (T6SS). May be required for export of proteins involved in Rhs-mediated cellular contact-dependent growth inhibition (CDI)
 
   
 0.904
ADM97677.1
ImpB; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown
 
 
 0.887
ADM97682.1
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown
 
   
 0.823
ADM97679.1
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown
 
  
 0.819
ADM97690.1
IcmF-related protein; 5.10 cell processes; defense/survivial
 
  
 0.809
ADM97680.1
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown
 
  
 0.802
ADM97681.1
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown
 
   
 0.801
ADM97685.1
Chemotaxis motB protein; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown
 
  
 0.799
ADM97684.1
ImpJ; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown
 
   
 0.799
Your Current Organism:
Dickeya dadantii 3937
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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