STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdgK2-dehydro-3-deoxygluconate kinase; Catalyzes the phosphorylation of 2-keto-3-deoxygluconate (KDG) to produce 2-keto-3-deoxy-6-phosphogluconate (KDPG). Belongs to the carbohydrate kinase PfkB family. (310 aa)    
Predicted Functional Partners:
kdgA
2-dehydro-3-deoxyphosphogluconate aldolase; Protein involved in catalytic activity, carbohydrate catabolic process, Entner-Doudoroff pathway, glyoxylate catabolic process and metabolic process; Belongs to the KHG/KDPG aldolase family.
 
 
 0.955
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.912
kduD
2-deoxy-D-gluconate 3-dehydrogenase; Catalyzes the reduction of 2,5-diketo-3-deoxygluconate (DKII or 4,6-dihydroxy-2,5-dioxohexanoate) into 2-keto-3-deoxygluconate (KDG or 2-dehydro-3-deoxygluconate) with a concomitant oxidation of NADH.
 
 0.897
rspA
Protein involved in catalytic activity, response to starvation and metabolic process.
 
  
 0.878
uxaA
Altronate hydrolase; Protein involved in hydro-lyase activity and carbohydrate catabolic process.
 
  
 0.876
rpe
D-ribulose-5-phosphate 3-epimerase; Protein involved in catalytic activity, ribulose-phosphate 3-epimerase activity, pentose-phosphate shunt, oxidative branch, carbohydrate catabolic process, pentose-phosphate shunt, non-oxidative branch, metabolic process and carbohydrate metabolic process.
  
 0.861
araB
L-ribulokinase; Protein involved in ribulokinase activity, carbohydrate catabolic process, carbohydrate metabolic process and L-arabinose catabolic process.
     
 0.804
ADM96340.1
4-oxalocrotonate tautomerase; Protein involved in (DEPRECATED) molecular function unknown, isomerase activity, (DEPRECATED) biological process unknown and cellular aromatic compound metabolic process; Belongs to the 4-oxalocrotonate tautomerase family.
       0.773
ADM96339.1
Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown.
       0.773
ADM96984.1
Protein involved in carbohydrate catabolic process.
 
  
 0.643
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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