STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM96818.1Putative zinc-containing alcohol dehydrogenase; Protein involved in (DEPRECATED) electron acceptor activity, zinc ion binding, oxidoreductase activity, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor and NAD binding. (333 aa)    
Predicted Functional Partners:
fabF
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.711
ADM96817.1
Oxidoreductase; Protein involved in oxidoreductase activity and metabolic process; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    0.680
ADM96816.1
Oxidoreductase, short chain dehydrogenase/reductase family; Protein involved in (DEPRECATED) electron acceptor activity, oxidoreductase activity and metabolic process; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    0.636
fabD
malonyl-CoA-[acyl-carrier-protein] transacylase; Protein involved in [acyl-carrier-protein] S-malonyltransferase activity, transferase activity, fatty acid biosynthetic process and metabolic process.
 
    
 0.583
ADM96998.1
3-oxoacyl-acyl carrier protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.539
yfcX
Fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 
 0.477
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 
 0.477
ADM96815.1
Oxidoreductase, aldo/keto reductase family; Protein involved in oxidoreductase activity.
 
  
 0.429
ADM96950.1
Protein involved in electron carrier activity, oxidoreductase activity, iron-sulfur cluster binding, catalytic activity, thiamin pyrophosphate binding, iron ion binding, oxidoreductase activity, acting on the aldehyde or oxo group of donors, tricarboxylic acid cycle, fermentation and (OBSOLETE) electron transport.
  
  
 0.409
rspB
Starvation sensing protein rspB; Protein involved in zinc ion binding, oxidoreductase activity and response to starvation.
 
   
 0.404
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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