STRINGSTRING
ribF protein (Buchnera aphidicola Sg) - STRING interaction network
"ribF" - annotation not available in Buchnera aphidicola Sg
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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Textmining
[Homology]
Score
ribFannotation not available (312 aa)    
Predicted Functional Partners:
ribE
Riboflavin synthase; Catalyzes the dismutation of two molecules of 6,7- dimethyl-8-ribityllumazine, resulting in the formation of riboflavin and 5-amino-6-(D-ribitylamino)uracil (208 aa)
   
  0.966
ileS
Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile); Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily (938 aa)
   
        0.888
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (312 aa)
 
   
  0.869
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family (156 aa)
   
   
  0.867
kdtB
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate; Belongs to the bacterial CoaD family (165 aa)
 
   
  0.815
lytB
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis (313 aa)
   
   
  0.815
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (89 aa)
   
   
  0.774
ribD1
annotation not available (147 aa)
 
   
  0.747
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis; Belongs to the PTH family (177 aa)
   
   
  0.698
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (579 aa)
   
   
  0.689
Your Current Organism:
Buchnera aphidicola Sg
NCBI taxonomy Id: 198804
Other names: B. aphidicola str. Sg (Schizaphis graminum), Buchnera aphidicola Sg, Buchnera aphidicola str. Sg, Buchnera aphidicola str. Sg (Schizaphis graminum)
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