STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRIM2DNA primase subunit 2. (509 aa)    
Predicted Functional Partners:
ENSCPUP00000001173
annotation not available
   
 0.999
ENSCPUP00000005379
annotation not available
  
 0.999
POLA1
DNA polymerase alpha 1, catalytic subunit.
   
 0.999
POLE
DNA polymerase epsilon, catalytic subunit.
   
 0.995
REV3L
REV3 like, DNA directed polymerase zeta catalytic subunit.
   
 0.993
RFC4
Replication factor C subunit 4.
  
 0.992
POLE2
DNA polymerase epsilon 2, accessory subunit.
   
 0.992
PCNA
Proliferating cell nuclear antigen.
  
 
 0.989
POLD2
DNA polymerase delta 2, accessory subunit.
  
 
 0.979
RFC3
Replication factor C subunit 3.
  
 0.979
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.