STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106896480Parathyroid hormone/parathyroid hormone-related peptide receptor-like. (541 aa)    
Predicted Functional Partners:
PTH
Parathyroid hormone.
    
 0.969
PTHLH
Parathyroid hormone like hormone.
    
 0.958
ENSCPUP00000000773
annotation not available
    
  0.876
GNA12
G protein subunit alpha 12.
    
  0.852
GNA13
G protein subunit alpha 13.
    
  0.852
PTH1R
Parathyroid hormone 1 receptor.
  
  
 
0.833
CRH
Corticotropin releasing hormone.
    
 0.769
GNAL
G protein subunit alpha L.
    
 0.755
ENSCPUP00000009624
annotation not available
    
 0.755
GNAS
GNAS complex locus.
    
 0.755
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.