STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000020676annotation not available (132 aa)    
Predicted Functional Partners:
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 0.985
TIMM13
Translocase of inner mitochondrial membrane 13.
   
 0.931
CACTIN
Cactin, spliceosome C complex subunit.
   
 0.904
TIMM22
Translocase of inner mitochondrial membrane 22.
   
 0.904
AGK
Acylglycerol kinase.
    
 0.900
TIMM23B
Translocase of inner mitochondrial membrane 23 homolog B.
   
 0.831
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
   
 0.797
SDHC
Succinate dehydrogenase complex subunit C.
   
 0.765
ENSCPUP00000011834
annotation not available
    
 0.756
ENSCPUP00000011835
annotation not available
    
 0.756
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.