STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO22564.1acetyl-CoA synthetase. (560 aa)    
Predicted Functional Partners:
SFQ40218.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.927
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
   
 
 0.903
SFO58652.1
Methyltransferase domain-containing protein.
  
 0.901
SFQ37819.1
8-amino-7-oxononanoate synthase.
  
 0.897
SFN52277.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.894
SFN13497.1
Malate synthase; Belongs to the malate synthase family.
   
 0.891
SFO22578.1
fatty-acyl-CoA synthase.
 
 
 
0.887
SFN57127.1
Citrate synthase.
  
 0.885
SFO59707.1
Citrate synthase.
  
 0.885
SFQ31882.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.885
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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