STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
picPic serine protease precursor; Involved in virulence of uropathogenic E.coli although it is not known how it contributes to it. Has no mucinase activity. (1371 aa)    
Predicted Functional Partners:
yggD
Hypothetical protein yggD; Escherichia coli K-12 ortholog: b2929; Escherichia coli O157:H7 ortholog: z4274.
  
     0.669
c3717
Hypothetical protein; Residues 3 to 342 of 356 are 29.54 pct identical to residues 2 to 350 of 372 from GenPept.129 : >gb|AAG07215.1|AE004800_4 (AE004800) conserved hypothetical protein [Pseudomonas aeruginosa].
  
     0.667
c3714
Hypothetical protein.
  
     0.664
yqcE
Hypothetical protein yqcE; Escherichia coli K-12 ortholog: b2775; Escherichia coli O157:H7 ortholog: z4086.
  
     0.639
ygfI
Hypothetical transcriptional regulator ygfI; Escherichia coli K-12 ortholog: b2921; Escherichia coli O157:H7 ortholog: z4258; Belongs to the LysR transcriptional regulatory family.
  
     0.638
c1204
Conserved hypothetical protein; Escherichia coli O157:H7 ortholog: z4849.
  
     0.618
inaA
Protein inaA; Escherichia coli K-12 ortholog: b2237; Escherichia coli O157:H7 ortholog: z3493.
  
     0.587
yaeF
Hypothetical lipoprotein yaeF precursor; Escherichia coli K-12 ortholog: b0193; Escherichia coli O157:H7 ortholog: z0205.
  
     0.576
yghQ
Hypothetical protein yghQ; Escherichia coli K-12 ortholog: b2983.
  
     0.562
ninB
Unknown protein encoded within prophage; Escherichia coli O157:H7 ortholog: z3351; Belongs to the ninB family.
  
     0.561
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.