STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (382 aa)    
Predicted Functional Partners:
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 0.999
galT
Galactose-1-phosphate uridylyltransferase; Escherichia coli K-12 ortholog: b0758; Escherichia coli O157:H7 ortholog: z0928; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
 0.999
galE
UDP-glucose 4-epimerase; Escherichia coli K-12 ortholog: b0759; Escherichia coli O157:H7 ortholog: z0929; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.980
yphB
Hypothetical protein yphB; Escherichia coli K-12 ortholog: b2544; Escherichia coli O157:H7 ortholog: z3816.
  
 0.951
c4831
Hypothetical protein; Residues 46 to 310 of 314 are 43.39 pct identical to residues 4 to 259 of 262 from GenPept.129 : >emb|CAB42038.1| (AL049754) hypothetical protein [Streptomyces coelicolor A3(2)].
  
 0.951
lacZ
Beta-galactosidase; Escherichia coli K-12 ortholog: b0344; Escherichia coli O157:H7 ortholog: z0440; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.922
c2560
UDP-glucose 4-epimerase; Escherichia coli K-12 ortholog: b0759; Escherichia coli O157:H7 ortholog: z0929; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.917
galU
UTP--glucose-1-phosphate uridylyltransferase; May play a role in stationary phase survival; Belongs to the UDPGP type 2 family.
     
 0.908
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
      
 0.904
ompT
Protease VII precursor; Escherichia coli K-12 ortholog: b0565; Escherichia coli O157:H7 ortholog: z1931.
      
 0.681
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.