STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yliAHypothetical ABC transporter ATP-binding protein yliA; Part of the ABC transporter complex GsiABCD involved in glutathione import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Glutathione importer (TC 3.A.1.5.11) family. (629 aa)    
Predicted Functional Partners:
gsiB
Putative binding protein yliB precursor; Part of the ABC transporter complex GsiABCD involved in glutathione import. Binds glutathione.
 
 
 0.999
yliC
Hypothetical ABC transporter permease protein yliC; Part of the ABC transporter complex GsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane.
 
 0.999
yliD
Hypothetical ABC transporter permease protein yliD; Part of the ABC transporter complex GsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane.
 
 0.999
ybiK
Putative L-asparaginase precursor; Escherichia coli K-12 ortholog: b0828; Escherichia coli O157:H7 ortholog: z1052.
 
  
 0.967
yddQ
Hypothetical ABC transporter permease protein yddQ; Escherichia coli K-12 ortholog: b1485; Escherichia coli O157:H7 ortholog: z2225.
  
 0.893
nikC
Nickel transport system permease protein nikC; Escherichia coli K-12 ortholog: b3478; Escherichia coli O157:H7 ortholog: z4870.
  
 0.873
c3508
Hypothetical protein; Escherichia coli O157:H7 ortholog: z4269.
  
 
 0.866
dppC
Dipeptide transport system permease protein dppC; Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily.
  
 0.854
oppC
Oligopeptide transport system permease protein oppC; Escherichia coli K-12 ortholog: b1245; Escherichia coli O157:H7 ortholog: z2021.
  
 0.826
nikB
Nickel transport system permease protein nikB; Escherichia coli K-12 ortholog: b3477; Escherichia coli O157:H7 ortholog: z4869.
  
 0.803
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.