Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cspG | gnsA | c1123 | c1125 | Cold shock-like protein cspG; CSP-G; Escherichia coli K-12 ortholog: b0990; Escherichia coli O157:H7 ortholog: z1406. | GnsB protein; Escherichia coli K-12 ortholog: b1550; Belongs to the gns family. | 0.490 |
cspG | sfa | c1123 | c1124 | Cold shock-like protein cspG; CSP-G; Escherichia coli K-12 ortholog: b0990; Escherichia coli O157:H7 ortholog: z1406. | Sfa protein; Escherichia coli K-12 ortholog: b0991; Escherichia coli O157:H7 ortholog: z1408. | 0.566 |
gnsA | cspG | c1125 | c1123 | GnsB protein; Escherichia coli K-12 ortholog: b1550; Belongs to the gns family. | Cold shock-like protein cspG; CSP-G; Escherichia coli K-12 ortholog: b0990; Escherichia coli O157:H7 ortholog: z1406. | 0.490 |
gnsA | sfa | c1125 | c1124 | GnsB protein; Escherichia coli K-12 ortholog: b1550; Belongs to the gns family. | Sfa protein; Escherichia coli K-12 ortholog: b0991; Escherichia coli O157:H7 ortholog: z1408. | 0.928 |
sfa | cspG | c1124 | c1123 | Sfa protein; Escherichia coli K-12 ortholog: b0991; Escherichia coli O157:H7 ortholog: z1408. | Cold shock-like protein cspG; CSP-G; Escherichia coli K-12 ortholog: b0990; Escherichia coli O157:H7 ortholog: z1406. | 0.566 |
sfa | gnsA | c1124 | c1125 | Sfa protein; Escherichia coli K-12 ortholog: b0991; Escherichia coli O157:H7 ortholog: z1408. | GnsB protein; Escherichia coli K-12 ortholog: b1550; Belongs to the gns family. | 0.928 |