STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mchBMchB protein; Bactericidal antibiotic. Active on bacteria phylogenetically related to the producing strain (By similarity). (97 aa)    
Predicted Functional Partners:
mchC
MchC protein; Residues 1 to 516 of 516 are 73.44 pct identical to residues 9 to 524 of 524 from GenPept.129 : >gb|AAL08403.1| (AF063590) MceJ [Klebsiella pneumoniae].
     
 0.707
mchF
Probable microcin H47 secretion ATP-binding protein; ABC transporter; Residues 7 to 704 of 704 are 98.71 pct identical to residues 1 to 698 of 698 from SwissProt.40 : >sp|Q9EXN5|MCHF_ECOLI Probable microcin H47 secretion ATP-binding protein mchF.
  
  
 0.614
celB
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
      
 0.520
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.