Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cfa | entF | c2055 | c0673 | Cyclopropane-fatty-acyl-phospholipid synthase; Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Belongs to the CFA/CMAS family. | Enterobactin synthetase component F; Escherichia coli K-12 ortholog: b0586; Escherichia coli O157:H7 ortholog: z0727. | 0.457 |
cfa | otsA | c2055 | c2310 | Cyclopropane-fatty-acyl-phospholipid synthase; Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Belongs to the CFA/CMAS family. | Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family. | 0.487 |
cfa | ydhC | c2055 | c2054 | Cyclopropane-fatty-acyl-phospholipid synthase; Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Belongs to the CFA/CMAS family. | Hypothetical transport protein ydhC; Escherichia coli K-12 ortholog: b1660; Escherichia coli O157:H7 ortholog: z2685. | 0.421 |
cfa | ydiU | c2055 | c2102 | Cyclopropane-fatty-acyl-phospholipid synthase; Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Belongs to the CFA/CMAS family. | Hypothetical protein ydiU; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). | 0.491 |
entF | cfa | c0673 | c2055 | Enterobactin synthetase component F; Escherichia coli K-12 ortholog: b0586; Escherichia coli O157:H7 ortholog: z0727. | Cyclopropane-fatty-acyl-phospholipid synthase; Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Belongs to the CFA/CMAS family. | 0.457 |
otsA | cfa | c2310 | c2055 | Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family. | Cyclopropane-fatty-acyl-phospholipid synthase; Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Belongs to the CFA/CMAS family. | 0.487 |
ydhC | cfa | c2054 | c2055 | Hypothetical transport protein ydhC; Escherichia coli K-12 ortholog: b1660; Escherichia coli O157:H7 ortholog: z2685. | Cyclopropane-fatty-acyl-phospholipid synthase; Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Belongs to the CFA/CMAS family. | 0.421 |
ydiU | cfa | c2102 | c2055 | Hypothetical protein ydiU; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). | Cyclopropane-fatty-acyl-phospholipid synthase; Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Belongs to the CFA/CMAS family. | 0.491 |