Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
c2212 | yeaZ | c2212 | c2211 | Probable ATP-dependent helicase yoaA; Escherichia coli K-12 ortholog: b1808; Escherichia coli O157:H7 ortholog: z2851. | Hypothetical protease yeaZ; Escherichia coli K-12 ortholog: b1807; Escherichia coli O157:H7 ortholog: z2850. | 0.634 |
c2212 | yoaB | c2212 | c2213 | Probable ATP-dependent helicase yoaA; Escherichia coli K-12 ortholog: b1808; Escherichia coli O157:H7 ortholog: z2851. | Hypothetical protein yoaB; Escherichia coli K-12 ortholog: b1809; Escherichia coli O157:H7 ortholog: z2852; Belongs to the RutC family. | 0.586 |
dadA | yoaB | c1638 | c2213 | D-amino acid dehydrogenase small subunit; Oxidative deamination of D-amino acids; Belongs to the DadA oxidoreductase family. | Hypothetical protein yoaB; Escherichia coli K-12 ortholog: b1809; Escherichia coli O157:H7 ortholog: z2852; Belongs to the RutC family. | 0.463 |
ycdK | yoaB | c1147 | c2213 | Hypothetical protein ycdK; May reduce aminoacrylate peracid to aminoacrylate. Required to remove a toxic intermediate produce by the pyrimidine nitrogen degradation (By similarity). | Hypothetical protein yoaB; Escherichia coli K-12 ortholog: b1809; Escherichia coli O157:H7 ortholog: z2852; Belongs to the RutC family. | 0.551 |
yeaZ | c2212 | c2211 | c2212 | Hypothetical protease yeaZ; Escherichia coli K-12 ortholog: b1807; Escherichia coli O157:H7 ortholog: z2850. | Probable ATP-dependent helicase yoaA; Escherichia coli K-12 ortholog: b1808; Escherichia coli O157:H7 ortholog: z2851. | 0.634 |
yeaZ | yoaB | c2211 | c2213 | Hypothetical protease yeaZ; Escherichia coli K-12 ortholog: b1807; Escherichia coli O157:H7 ortholog: z2850. | Hypothetical protein yoaB; Escherichia coli K-12 ortholog: b1809; Escherichia coli O157:H7 ortholog: z2852; Belongs to the RutC family. | 0.462 |
yhaR | yoaB | c3871 | c2213 | TdcF protein; May be a post-translational regulator that controls the metabolic fate of L-threonine or the potentially toxic intermediate 2- ketobutyrate. | Hypothetical protein yoaB; Escherichia coli K-12 ortholog: b1809; Escherichia coli O157:H7 ortholog: z2852; Belongs to the RutC family. | 0.426 |
yoaB | c2212 | c2213 | c2212 | Hypothetical protein yoaB; Escherichia coli K-12 ortholog: b1809; Escherichia coli O157:H7 ortholog: z2852; Belongs to the RutC family. | Probable ATP-dependent helicase yoaA; Escherichia coli K-12 ortholog: b1808; Escherichia coli O157:H7 ortholog: z2851. | 0.586 |
yoaB | dadA | c2213 | c1638 | Hypothetical protein yoaB; Escherichia coli K-12 ortholog: b1809; Escherichia coli O157:H7 ortholog: z2852; Belongs to the RutC family. | D-amino acid dehydrogenase small subunit; Oxidative deamination of D-amino acids; Belongs to the DadA oxidoreductase family. | 0.463 |
yoaB | ycdK | c2213 | c1147 | Hypothetical protein yoaB; Escherichia coli K-12 ortholog: b1809; Escherichia coli O157:H7 ortholog: z2852; Belongs to the RutC family. | Hypothetical protein ycdK; May reduce aminoacrylate peracid to aminoacrylate. Required to remove a toxic intermediate produce by the pyrimidine nitrogen degradation (By similarity). | 0.551 |
yoaB | yeaZ | c2213 | c2211 | Hypothetical protein yoaB; Escherichia coli K-12 ortholog: b1809; Escherichia coli O157:H7 ortholog: z2852; Belongs to the RutC family. | Hypothetical protease yeaZ; Escherichia coli K-12 ortholog: b1807; Escherichia coli O157:H7 ortholog: z2850. | 0.462 |
yoaB | yhaR | c2213 | c3871 | Hypothetical protein yoaB; Escherichia coli K-12 ortholog: b1809; Escherichia coli O157:H7 ortholog: z2852; Belongs to the RutC family. | TdcF protein; May be a post-translational regulator that controls the metabolic fate of L-threonine or the potentially toxic intermediate 2- ketobutyrate. | 0.426 |