STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadJPutative fatty oxidation complex alpha subunit; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (714 aa)    
Predicted Functional Partners:
fadI
Probable 3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
 0.999
fadA
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. Involved in the aerobic and anaerobic degradation of long-chain fatty acids (By similarity).
 0.999
atoB
Acetyl-CoA acetyltransferase; Escherichia coli K-12 ortholog: b2224; Escherichia coli O157:H7 ortholog: z4164; Belongs to the thiolase-like superfamily. Thiolase family.
 0.998
yqeF
Probable acetyl-CoA acetyltransferase; Escherichia coli K-12 ortholog: b2844; Escherichia coli O157:H7 ortholog: z4164; Belongs to the thiolase-like superfamily. Thiolase family.
 0.998
yafH
Acyl-coenzyme A dehydrogenase; Escherichia coli K-12 ortholog: b0221; Escherichia coli O157:H7 ortholog: z0278.
 
 0.996
fadB
Fatty oxidation complex alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
 
0.976
c2464
Putative acyl-coa dehydrogenase; Residues 3 to 335 of 342 are 35.02 pct identical to residues 35 to 368 of 382 from GenPept.129 : >gb|AAD40109.1|AF155831_3 (AF155831) unknown [Bacillus cereus].
 0.964
atoA
Acetate CoA-transferase beta subunit; Escherichia coli K-12 ortholog: b2222.
  
 0.956
atoD
Acetate CoA-transferase alpha subunit; Escherichia coli K-12 ortholog: b2221.
  
 
 0.954
c5301
Hypothetical protein; Residues 4 to 255 of 258 are 36.75 pct identical to residues 3 to 254 of 256 from GenPept.129 : >gb|AAK65427.1| (AE007264) Putative dehydratase [Sinorhizobium meliloti]; Belongs to the enoyl-CoA hydratase/isomerase family.
0.949
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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