STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygaUUnknown protein from 2D-page; Highly specific potassium binding protein that is required for normal growth in the presence of high levels of external K(+). May act as a sensor of cytoplasmic K(+) concentration. (149 aa)    
Predicted Functional Partners:
yegP
Hypothetical protein yegP; Escherichia coli K-12 ortholog: b2080; Escherichia coli O157:H7 ortholog: z3249; Belongs to the UPF0339 family. Duplicated subfamily.
 
   0.928
c0971
Probable major tail sheath protein; Escherichia coli O157:H7 ortholog: z2991.
  
 
 0.830
c0964
Phage baseplate assembly protein; Residues 4 to 110 of 119 are 53.70 pct identical to residues 5 to 112 of 115 from SwissProt.40 : >sp|P51768|VPW_BPP2 BASEPLATE ASSEMBLY PROTEIN W (GPW).
  
   0.819
ybaY
Hypothetical protein ybaY precursor; Escherichia coli K-12 ortholog: b0453; Escherichia coli O157:H7 ortholog: z0565.
  
  
 0.756
hofQ
Protein transport protein hofQ precursor; Escherichia coli K-12 ortholog: b3391; Escherichia coli O157:H7 ortholog: z4744.
   
 
 0.725
osmY
Osmotically inducible protein Y precursor; Escherichia coli K-12 ortholog: b4376; Escherichia coli O157:H7 ortholog: z5977.
  
  
 0.713
c0978
Putative regulator of late gene expression; Residues 15 to 364 of 366 are 56.52 pct identical to residues 15 to 381 of 389 from SwissProt.40 : >sp|P21679|VPD_BP186 LATE CONTROL GENE D PROTEIN (GPD).
  
   0.712
yqjC
Protein yqjC precursor; Escherichia coli K-12 ortholog: b3097; Escherichia coli O157:H7 ortholog: z4451.
  
    0.710
elaB
ElaB protein; Escherichia coli K-12 ortholog: b2266; Escherichia coli O157:H7 ortholog: z3526; Belongs to the ElaB/YgaM/YqjD family.
   
  
 0.690
yqjD
Hypothetical protein yqjD; Escherichia coli K-12 ortholog: b3098; Escherichia coli O157:H7 ortholog: z4452; Belongs to the ElaB/YgaM/YqjD family.
   
  
 0.684
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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