Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
c3353 | c3354 | c3353 | c3354 | Probable glucarate transporter; D-glucarate permease; Escherichia coli K-12 ortholog: b2789; Escherichia coli O157:H7 ortholog: z4105. | Hypothetical protein. | 0.538 |
c3353 | c3355 | c3353 | c3355 | Probable glucarate transporter; D-glucarate permease; Escherichia coli K-12 ortholog: b2789; Escherichia coli O157:H7 ortholog: z4105. | Hypothetical protein. | 0.411 |
c3353 | ygcY | c3353 | c3352 | Probable glucarate transporter; D-glucarate permease; Escherichia coli K-12 ortholog: b2789; Escherichia coli O157:H7 ortholog: z4105. | Glucarate dehydratase related protein; Escherichia coli K-12 ortholog: b2788; Escherichia coli O157:H7 ortholog: z4103. | 0.961 |
c3354 | c3353 | c3354 | c3353 | Hypothetical protein. | Probable glucarate transporter; D-glucarate permease; Escherichia coli K-12 ortholog: b2789; Escherichia coli O157:H7 ortholog: z4105. | 0.538 |
c3354 | c3355 | c3354 | c3355 | Hypothetical protein. | Hypothetical protein. | 0.572 |
c3354 | ygcY | c3354 | c3352 | Hypothetical protein. | Glucarate dehydratase related protein; Escherichia coli K-12 ortholog: b2788; Escherichia coli O157:H7 ortholog: z4103. | 0.538 |
c3355 | c3353 | c3355 | c3353 | Hypothetical protein. | Probable glucarate transporter; D-glucarate permease; Escherichia coli K-12 ortholog: b2789; Escherichia coli O157:H7 ortholog: z4105. | 0.411 |
c3355 | c3354 | c3355 | c3354 | Hypothetical protein. | Hypothetical protein. | 0.572 |
c3355 | ygcY | c3355 | c3352 | Hypothetical protein. | Glucarate dehydratase related protein; Escherichia coli K-12 ortholog: b2788; Escherichia coli O157:H7 ortholog: z4103. | 0.411 |
ygcY | c3353 | c3352 | c3353 | Glucarate dehydratase related protein; Escherichia coli K-12 ortholog: b2788; Escherichia coli O157:H7 ortholog: z4103. | Probable glucarate transporter; D-glucarate permease; Escherichia coli K-12 ortholog: b2789; Escherichia coli O157:H7 ortholog: z4105. | 0.961 |
ygcY | c3354 | c3352 | c3354 | Glucarate dehydratase related protein; Escherichia coli K-12 ortholog: b2788; Escherichia coli O157:H7 ortholog: z4103. | Hypothetical protein. | 0.538 |
ygcY | c3355 | c3352 | c3355 | Glucarate dehydratase related protein; Escherichia coli K-12 ortholog: b2788; Escherichia coli O157:H7 ortholog: z4103. | Hypothetical protein. | 0.411 |