STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argAAmino-acid acetyltransferase; Escherichia coli K-12 ortholog: b2818; Escherichia coli O157:H7 ortholog: z4135; Belongs to the acetyltransferase family. ArgA subfamily. (465 aa)    
Predicted Functional Partners:
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
 
 0.999
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate.
 
 
 0.999
argG
Argininosuccinate synthase; Escherichia coli K-12 ortholog: b3172; Escherichia coli O157:H7 ortholog: z4534; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
 
  
 0.990
argH
Argininosuccinate lyase; Escherichia coli K-12 ortholog: b3960; Escherichia coli O157:H7 ortholog: z5518.
 
  
 0.941
gdhA
NADP-specific glutamate dehydrogenase; Escherichia coli K-12 ortholog: b1761; Escherichia coli O157:H7 ortholog: z2793; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.928
argD
Acetylornithine aminotransferase; Involved in both the arginine and lysine biosynthetic pathways.
  
  
 0.919
aspC
Aspartate aminotransferase; Escherichia coli K-12 ortholog: b0928; Escherichia coli O157:H7 ortholog: z1275.
     
 0.916
alaA
Probable aminotransferase yfbQ; Involved in the biosynthesis of alanine.
  
 
 0.913
gltB
Glutamate synthase [NADPH] large chain precursor; Escherichia coli K-12 ortholog: b3212; Escherichia coli O157:H7 ortholog: z4576.
 
   
 0.910
argR
Arginine repressor; Regulates arginine biosynthesis genes; Belongs to the ArgR family.
  
  
 0.907
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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