STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
satSecreted auto transpoter toxin; Shows serine protease activity and displays cytophatic activity, including elongation, rounding, and detachment of a proportion of the cells from monolayer in culture. Triggers vacuolation within the cytoplasm of the human bladder and kidney cells. (1299 aa)    
Predicted Functional Partners:
c3618
Hypothetical protein; Residues 40 to 232 of 232 are 98.44 pct identical to residues 1 to 193 of 193 from GenPept.129 : >gb|AAK00460.1| (AF200692) unknown [Shigella flexneri 2a].
       0.773
ydeU
Hypothetical protein ydeU; Escherichia coli K-12 ortholog: b1509.
  
   
 0.707
c3714
Hypothetical protein.
  
     0.660
c3717
Hypothetical protein; Residues 3 to 342 of 356 are 29.54 pct identical to residues 2 to 350 of 372 from GenPept.129 : >gb|AAG07215.1|AE004800_4 (AE004800) conserved hypothetical protein [Pseudomonas aeruginosa].
  
     0.658
yggD
Hypothetical protein yggD; Escherichia coli K-12 ortholog: b2929; Escherichia coli O157:H7 ortholog: z4274.
  
     0.647
yqcE
Hypothetical protein yqcE; Escherichia coli K-12 ortholog: b2775; Escherichia coli O157:H7 ortholog: z4086.
  
     0.635
ygfI
Hypothetical transcriptional regulator ygfI; Escherichia coli K-12 ortholog: b2921; Escherichia coli O157:H7 ortholog: z4258; Belongs to the LysR transcriptional regulatory family.
  
     0.630
yaeF
Hypothetical lipoprotein yaeF precursor; Escherichia coli K-12 ortholog: b0193; Escherichia coli O157:H7 ortholog: z0205.
  
     0.617
inaA
Protein inaA; Escherichia coli K-12 ortholog: b2237; Escherichia coli O157:H7 ortholog: z3493.
  
     0.600
c1204
Conserved hypothetical protein; Escherichia coli O157:H7 ortholog: z4849.
  
     0.599
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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